Initial commit

.github/ISSUE_TEMPLATE.md

+Please delete the text below before submitting your contribution. 
+
+---
+
+Thanks for contributing! If this contribution is for instructor training, please send an email to checkout@carpentries.org with a link to this contribution so we can record your progress. You’ve completed your contribution step for instructor checkout just by submitting this contribution.  
+
+Please keep in mind that lesson maintainers are volunteers and it may be some time before they can respond to your contribution. Although not all contributions can be incorporated into the lesson materials, we appreciate your time and effort to improve the curriculum.  If you have any questions about the lesson maintenance process or would like to volunteer your time as a contribution reviewer, please contact Kate Hertweck (k8hertweck@gmail.com).  
+
+---

.github/PULL_REQUEST_TEMPLATE.md

+Please delete the text below before submitting your contribution. 
+
+---
+
+Thanks for contributing! If this contribution is for instructor training, please send an email to checkout@carpentries.org with a link to this contribution so we can record your progress. You’ve completed your contribution step for instructor checkout just by submitting this contribution.  
+
+Please keep in mind that lesson maintainers are volunteers and it may be some time before they can respond to your contribution. Although not all contributions can be incorporated into the lesson materials, we appreciate your time and effort to improve the curriculum.  If you have any questions about the lesson maintenance process or would like to volunteer your time as a contribution reviewer, please contact Kate Hertweck (k8hertweck@gmail.com).  
+
+---

.gitignore

+*.pyc
+*~
+.DS_Store
+.ipynb_checkpoints
+.sass-cache
+__pycache__
+_site

.mailmap

+Abigail Cabunoc Mayes <abigail.cabunoc@gmail.com>
+Abigail Cabunoc Mayes <abigail.cabunoc@gmail.com> <abigail.cabunoc@oicr.on.ca>
+Alois Heilmaier <a.heilmaier@hotmail.com>
+Andrew Lonsdale <andrew.lonsdale@lonsbio.com.au>
+Andrew Rohl <a.rohl@curtin.edu.au>
+Ariel Rokem <arokem@gmail.com>
+Arnstein Orten <arnstein.orten@gmail.com>
+Bennet Fauber <justbennet@users.noreply.github.com>
+Bérénice Batut <berenice.batut@gmail.com>
+Bérénice Batut <berenice.batut@gmail.com> <berenice.batut@udamail.fr>
+Bernhard Konrad <bernhard.konrad@gmail.com>
+Bill Mills <mills.wj@gmail.com>
+Brenna O'Brien <info@brennaobrien.com>
+Chris Pawsey <chris.bording@pawsey.org.au>
+Christoph Junghans <christoph.junghans@gmail.com> <junghans@votca.org>
+Daisie Huang <daisieh@gmail.com>
+Danielle Traphagen <dtrapezoid@gmail.com>
+Dorota Jarecka <djarecka@gmail.com>
+Emily Dolson <emilyldolson@gmail.com>
+Emmanouil Farsarakis <farsarakis@gmail.com> <farsarakis@epcc.ed.ac.uk>
+Erin Becker <erinstellabecker@gmail.com>
+Evan P. Williamson <evanpeterw@gmail.com>
+François Michonneau <francois.michonneau@gmail.com>
+Greg Watson <g.watson@computer.org>
+Greg Wilson <gvwilson@software-carpentry.org> <gvwilson@third-bit.com>
+Ivan Gonzalez <iglpdc@gmail.com> <iglpdc@users.noreply.github.com>
+James Allen <james@sharelatex.com> <jamesallen0108@gmail.com>
+Jane Charlesworth <janepipistrelle@gmail.com>
+Kate Lee <kl167@le.ac.uk>
+Luke W. Johnston <lwjohnst@gmail.com>
+Marisa Guarinello <mguarinello@gmail.com>
+Mark Wheelhouse <mjw03@doc.ic.ac.uk>
+Mary C. Kinniburgh <mckinniburgh@gmail.com>
+Mateusz Kuzak <mateusz.kuzak@gmail.com>
+Matthias Haeni <datamat@users.noreply.github.com>
+Maxim Belkin <maxim.belkin@gmail.com> <maxim-belkin@users.noreply.github.com>
+Michael Panitz <michpa@hotmail.com>
+Mike Jackson <m.jackson@software.ac.uk> <michaelj@epcc.ed.ac.uk>
+Nicholas Hannah <nchlshnnh@gmail.com> <nicholash@users.noreply.github.com>
+Nicola Soranzo <nicola.soranzo@earlham.ac.uk> <nsoranzo@tiscali.it>
+Patrick C. Shriwise <shriwise@wisc.edu>
+Pauline Barmby <pbarmby@uwo.ca>
+Peter Steinbach <steinbac@mpi-cbg.de> <steinbach@scionics.de>
+Raniere Silva <raniere@rgaiacs.com> <ra092767@ime.unicamp.br>
+Raniere Silva <raniere@rgaiacs.com> <raniere@ime.unicamp.br>
+Rémi Emonet <remi@heeere.com> <remi.emonet@reverse--com.heeere>
+Rémi Emonet <remi@heeere.com> <twitwi@users.noreply.github.com>
+Sarah Stevens <ssteven2@wisc.edu> <sstevens2@wisc.edu>
+Sean Aubin <saubin@uwaterloo.ca>
+Steve Vandervalk <steven.vandervalk@jcu.edu.au> <stevenvandervalk@users.noreply.github.com>
+Tiffany Timbers <tiffany.timbers@gmail.com>
+Timothée Poisot <t.poisot@gmail.com> <tim@poisotlab.io>
+Tom Kelly <tomkellygenetics@gmail.com>
+Vijay P. Nagraj <vpnagraj@virginia.edu>
+Yuandra Ismiraldi <me@yuandraismiraldi.net>
+zz-abracarambar <abracarambar@users.noreply.github.com>

.update-copyright.conf

+[project]
+vcs: Git
+
+[files]
+authors: yes
+files: no

AUTHORS

+Alison Appling
+Sean Aubin
+Pete Bachant
+Daniel Baird
+Pauline Barmby
+Bérénice Batut
+Maxim Belkin
+Madeleine Bonsma
+Jon Borrelli
+Andy Boughton
+Daina Bouquin
+Rudi Brauning
+Matthew Brett
+Amy Brown
+Jane Charlesworth
+Billy Charlton
+Daniel Chen
+Garret Christensen
+Ruth Collings
+Marianne Corvellec
+Matt Davis
+Emily Dolson
+Laurent Duchesne
+Jonah Duckles
+Rémi Emonet
+Loïc Estève
+Emmanouil Farsarakis
+Bennet Fauber
+Anne Fouilloux
+Stuart Geiger
+Ivan Gonzalez
+Marisa Guarinello
+Stéphane Guillou
+Jamie Hadwin
+Matthias Haeni
+Pierre Haessig
+Nicholas Hannah
+Sumana Harihareswara
+Alois Heilmaier
+Martin Heroux
+Kate Hertweck
+Daisie Huang
+Yuandra Ismiraldi
+Christian Jacobs
+Dorota Jarecka
+Luke W. Johnston
+David Jones
+Zbigniew Jędrzejewski-Szmek
+Tom Kelly
+W. Trevor King
+Thomas Kluyver
+Bernhard Konrad
+Mateusz Kuzak
+Arne Küderle
+Kathleen Labrie
+Hilmar Lapp
+Mark Laufersweiler
+David LeBauer
+Kate Lee
+Matthias Liffers
+Clara Llebot
+Catrina Loucks
+Keith Ma
+Kunal Marwaha
+Ryan May
+Bill Mills
+Andreas Mueller
+Madicken Munk
+Juan Nunez-Iglesias
+Brenna O'Brien
+Catherine Olsson
+Michael Panitz
+Chris Pawsey
+Stefan Pfenninger
+Paul Preney
+Timothy Rice
+Kristina Riemer
+Annika Rockenberger
+Andrew Rohl
+Ariel Rokem
+Bill Sacks
+Michael Sarahan
+Sebastian Schmeier
+Hartmut Schmider
+Peter Shellito
+Patrick C. Shriwise
+Raniere Silva
+Brendan Smithyman
+Nicola Soranzo
+Peter Steinbach
+Sarah Stevens
+Oliver Stueker
+Benjamin Stuermer
+Tiffany Timbers
+Danielle Traphagen
+Tim Tröndle
+Anelda van der Walt
+Steve Vandervalk
+Greg Watson
+Belinda Weaver
+Mark Wheelhouse
+Ethan White
+Greg Wilson
+Steven Wu
+Qingpeng Zhang
+Andrew Lonsdale
+Arnstein Orten
+Ben Bolker
+Christoph Junghans
+David Jennings
+James Tocknell
+Jonathan Cooper
+Katrin Leinweber
+Leo Browning
+Mary C. Kinniburgh
+Matthew Bourque
+Matthew Hartley
+Raphaël Grolimund
+Scott Bailey
+Todd Gamblin
+Tommy Keswick
+Vijay P. Nagraj
+Will Usher

CITATION

+Please cite as:
+
+Daisie Huang and Ivan Gonzalez (eds): "Software Carpentry: Version
+Control with Git."  Version 2016.06, June 2016,
+https://github.com/swcarpentry/git-novice, 10.5281/zenodo.57467.

CONDUCT.md

+---
+layout: page
+title: "Contributor Code of Conduct"
+permalink: /conduct/
+---
+As contributors and maintainers of this project,
+we pledge to respect all people who contribute through reporting issues,
+posting feature requests,
+updating documentation,
+submitting pull requests or patches,
+and other activities.
+
+We are committed to making participation in this project a harassment-free experience for everyone,
+regardless of level of experience,
+gender,
+gender identity and expression,
+sexual orientation,
+disability,
+personal appearance,
+body size,
+race,
+ethnicity,
+age,
+or religion.
+
+Examples of unacceptable behavior by participants include the use of sexual language or imagery,
+derogatory comments or personal attacks,
+trolling,
+public or private harassment,
+insults,
+or other unprofessional conduct.
+
+Project maintainers have the right and responsibility to remove, edit, or reject
+comments, commits, code, wiki edits, issues, and other contributions
+that are not aligned to our [Code of Conduct][coc].
+Project maintainers who do not follow the Code of Conduct may be removed from the project team.
+
+Instances of abusive, harassing, or otherwise unacceptable behavior
+may be reported by following our [reporting guidelines][coc-reporting].
+
+
+- [Software and Data Carpentry Code of Conduct][coc]
+- [Code of Conduct Reporting Guide][coc-reporting]
+
+{% include links.md %}

CONTRIBUTING.md

+# Contributing
+
+[Software Carpentry][swc-site] and [Data Carpentry][dc-site] are open source projects,
+and we welcome contributions of all kinds:
+new lessons,
+fixes to existing material,
+bug reports,
+and reviews of proposed changes are all welcome.
+
+## Contributor Agreement
+
+By contributing,
+you agree that we may redistribute your work under [our license](LICENSE.md).
+In exchange,
+we will address your issues and/or assess your change proposal as promptly as we can,
+and help you become a member of our community.
+Everyone involved in [Software Carpentry][swc-site] and [Data Carpentry][dc-site]
+agrees to abide by our [code of conduct](CONDUCT.md).
+
+## How to Contribute
+
+The easiest way to get started is to file an issue
+to tell us about a spelling mistake,
+some awkward wording,
+or a factual error.
+This is a good way to introduce yourself
+and to meet some of our community members.
+
+1.  If you do not have a [GitHub][github] account,
+    you can [send us comments by email][contact].
+    However,
+    we will be able to respond more quickly if you use one of the other methods described below.
+
+2.  If you have a [GitHub][github] account,
+    or are willing to [create one][github-join],
+    but do not know how to use Git,
+    you can report problems or suggest improvements by [creating an issue][new-issue].
+    This allows us to assign the item to someone
+    and to respond to it in a threaded discussion.
+
+3.  If you are comfortable with Git,
+    and would like to add or change material,
+    you can submit a pull request (PR).
+    Instructions for doing this are [included below](#using-github).
+
+## Where to Contribute
+
+1.  If you wish to change this lesson,
+    please work in <https://github.com/swcarpentry/git-novice>,
+    which can be viewed at <https://swcarpentry.github.io/git-novice>.
+
+2.  If you wish to change the example lesson,
+    please work in <https://github.com/swcarpentry/lesson-example>,
+    which documents the format of our lessons
+    and can be viewed at <https://swcarpentry.github.io/lesson-example>.
+
+3.  If you wish to change the template used for workshop websites,
+    please work in <https://github.com/swcarpentry/workshop-template>.
+    The home page of that repository explains how to set up workshop websites,
+    while the extra pages in <https://swcarpentry.github.io/workshop-template>
+    provide more background on our design choices.
+
+4.  If you wish to change CSS style files, tools,
+    or HTML boilerplate for lessons or workshops stored in `_includes` or `_layouts`,
+    please work in <https://github.com/swcarpentry/styles>.
+
+## What to Contribute
+
+There are many ways to contribute,
+from writing new exercises and improving existing ones
+to updating or filling in the documentation
+and submitting [bug reports][new-issue]
+about things that don't work, aren't clear, or are missing.
+If you are looking for ideas,
+please see [the list of issues for this repository][issues],
+or the issues for [Data Carpentry][dc-issues]
+and [Software Carpentry][swc-issues] projects.
+
+Comments on issues and reviews of pull requests are just as welcome:
+we are smarter together than we are on our own.
+Reviews from novices and newcomers are particularly valuable:
+it's easy for people who have been using these lessons for a while
+to forget how impenetrable some of this material can be,
+so fresh eyes are always welcome.
+
+## What *Not* to Contribute
+
+Our lessons already contain more material than we can cover in a typical workshop,
+so we are usually *not* looking for more concepts or tools to add to them.
+As a rule,
+if you want to introduce a new idea,
+you must (a) estimate how long it will take to teach
+and (b) explain what you would take out to make room for it.
+The first encourages contributors to be honest about requirements;
+the second, to think hard about priorities.
+
+We are also not looking for exercises or other material that only run on one platform.
+Our workshops typically contain a mixture of Windows, Mac OS X, and Linux users;
+in order to be usable,
+our lessons must run equally well on all three.
+
+## Using GitHub
+
+If you choose to contribute via GitHub,
+you may want to look at
+[How to Contribute to an Open Source Project on GitHub][how-contribute].
+In brief:
+
+1.  The published copy of the lesson is in the `gh-pages` branch of the repository
+    (so that GitHub will regenerate it automatically).
+    Please create all branches from that,
+    and merge the [master repository][repo]'s `gh-pages` branch into your `gh-pages` branch
+    before starting work.
+    Please do *not* work directly in your `gh-pages` branch,
+    since that will make it difficult for you to work on other contributions.
+
+2.  We use [GitHub flow][github-flow] to manage changes:
+    1.  Create a new branch in your desktop copy of this repository for each significant change.
+    2.  Commit the change in that branch.
+    3.  Push that branch to your fork of this repository on GitHub.
+    4.  Submit a pull request from that branch to the [master repository][repo].
+    5.  If you receive feedback,
+        make changes on your desktop and push to your branch on GitHub:
+        the pull request will update automatically.
+
+Each lesson has two maintainers who review issues and pull requests
+or encourage others to do so.
+The maintainers are community volunteers,
+and have final say over what gets merged into the lesson.
+
+## Other Resources
+
+General discussion of [Software Carpentry][swc-site] and [Data Carpentry][dc-site]
+happens on the [discussion mailing list][discuss-list],
+which everyone is welcome to join.
+You can also [reach us by email][contact].
+
+[contact]: mailto:admin@software-carpentry.org
+[dc-issues]: https://github.com/issues?q=user%3Adatacarpentry
+[dc-lessons]: http://datacarpentry.org/lessons/
+[dc-site]: http://datacarpentry.org/
+[discuss-list]: http://lists.software-carpentry.org/listinfo/discuss
+[github]: http://github.com
+[github-flow]: https://guides.github.com/introduction/flow/
+[github-join]: https://github.com/join
+[how-contribute]: https://egghead.io/series/how-to-contribute-to-an-open-source-project-on-github
+[new-issue]: https://github.com/swcarpentry/git-novice/issues/new
+[issues]: https://github.com/swcarpentry/git-novice/issues/
+[repo]: https://github.com/swcarpentry/git-novice/
+[swc-issues]: https://github.com/issues?q=user%3Aswcarpentry
+[swc-lessons]: http://software-carpentry.org/lessons/
+[swc-site]: http://software-carpentry.org/

LICENSE.md

+---
+layout: page
+title: "Licenses"
+permalink: /license/
+---
+## Instructional Material
+
+All Software Carpentry and Data Carpentry instructional material is
+made available under the [Creative Commons Attribution
+license][cc-by-human]. The following is a human-readable summary of
+(and not a substitute for) the [full legal text of the CC BY 4.0
+license][cc-by-legal].
+
+You are free:
+
+* to **Share**---copy and redistribute the material in any medium or format
+* to **Adapt**---remix, transform, and build upon the material
+
+for any purpose, even commercially.
+
+The licensor cannot revoke these freedoms as long as you follow the
+license terms.
+
+Under the following terms:
+
+* **Attribution**---You must give appropriate credit (mentioning that
+  your work is derived from work that is Copyright © Software
+  Carpentry and, where practical, linking to
+  http://software-carpentry.org/), provide a [link to the
+  license][cc-by-human], and indicate if changes were made. You may do
+  so in any reasonable manner, but not in any way that suggests the
+  licensor endorses you or your use.
+
+**No additional restrictions**---You may not apply legal terms or
+technological measures that legally restrict others from doing
+anything the license permits.  With the understanding that:
+
+Notices:
+
+* You do not have to comply with the license for elements of the
+  material in the public domain or where your use is permitted by an
+  applicable exception or limitation.
+* No warranties are given. The license may not give you all of the
+  permissions necessary for your intended use. For example, other
+  rights such as publicity, privacy, or moral rights may limit how you
+  use the material.
+
+## Software
+
+Except where otherwise noted, the example programs and other software
+provided by Software Carpentry and Data Carpentry are made available under the
+[OSI][osi]-approved
+[MIT license][mit-license].
+
+Permission is hereby granted, free of charge, to any person obtaining
+a copy of this software and associated documentation files (the
+"Software"), to deal in the Software without restriction, including
+without limitation the rights to use, copy, modify, merge, publish,
+distribute, sublicense, and/or sell copies of the Software, and to
+permit persons to whom the Software is furnished to do so, subject to
+the following conditions:
+
+The above copyright notice and this permission notice shall be
+included in all copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
+EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF
+MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
+NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE
+LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION
+OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION
+WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
+
+## Trademark
+
+"Software Carpentry" and "Data Carpentry" and their respective logos
+are registered trademarks of [NumFOCUS][numfocus].
+
+[cc-by-human]: https://creativecommons.org/licenses/by/4.0/
+[cc-by-legal]: https://creativecommons.org/licenses/by/4.0/legalcode
+[mit-license]: http://opensource.org/licenses/mit-license.html
+[numfocus]: http://numfocus.org/
+[osi]: http://opensource.org

Makefile

+## ========================================
+## Commands for both workshop and lesson websites.
+
+# Settings
+MAKEFILES=Makefile $(wildcard *.mk)
+JEKYLL=jekyll
+PARSER=bin/markdown_ast.rb
+DST=_site
+
+# Controls
+.PHONY : commands clean files
+.NOTPARALLEL:
+all : commands
+
+## commands         : show all commands.
+commands :
+	@grep -h -E '^##' ${MAKEFILES} | sed -e 's/## //g'
+
+## serve            : run a local server.
+serve : lesson-md
+	${JEKYLL} serve
+
+## site             : build files but do not run a server.
+site : lesson-md
+	${JEKYLL} build
+
+# repo-check        : check repository settings.
+repo-check :
+	@bin/repo_check.py -s .
+
+## clean            : clean up junk files.
+clean :
+	@rm -rf ${DST}
+	@rm -rf .sass-cache
+	@rm -rf bin/__pycache__
+	@find . -name .DS_Store -exec rm {} \;
+	@find . -name '*~' -exec rm {} \;
+	@find . -name '*.pyc' -exec rm {} \;
+
+## clean-rmd        : clean intermediate R files (that need to be committed to the repo).
+clear-rmd :
+	@rm -rf ${RMD_DST}
+	@rm -rf fig/rmd-*
+
+## ----------------------------------------
+## Commands specific to workshop websites.
+
+.PHONY : workshop-check
+
+## workshop-check   : check workshop homepage.
+workshop-check :
+	@bin/workshop_check.py .
+
+## ----------------------------------------
+## Commands specific to lesson websites.
+
+.PHONY : lesson-check lesson-md lesson-files lesson-fixme
+
+# RMarkdown files
+RMD_SRC = $(wildcard _episodes_rmd/??-*.Rmd)
+RMD_DST = $(patsubst _episodes_rmd/%.Rmd,_episodes/%.md,$(RMD_SRC))
+
+# Lesson source files in the order they appear in the navigation menu.
+MARKDOWN_SRC = \
+  index.md \
+  CONDUCT.md \
+  setup.md \
+  $(wildcard _episodes/*.md) \
+  reference.md \
+  $(wildcard _extras/*.md) \
+  LICENSE.md
+
+# Generated lesson files in the order they appear in the navigation menu.
+HTML_DST = \
+  ${DST}/index.html \
+  ${DST}/conduct/index.html \
+  ${DST}/setup/index.html \
+  $(patsubst _episodes/%.md,${DST}/%/index.html,$(wildcard _episodes/*.md)) \
+  ${DST}/reference/index.html \
+  $(patsubst _extras/%.md,${DST}/%/index.html,$(wildcard _extras/*.md)) \
+  ${DST}/license/index.html
+
+## lesson-md        : convert Rmarkdown files to markdown
+lesson-md : ${RMD_DST}
+
+# Use of .NOTPARALLEL makes rule execute only once
+${RMD_DST} : ${RMD_SRC}
+	@bin/knit_lessons.sh ${RMD_SRC}
+
+## lesson-check     : validate lesson Markdown.
+lesson-check :
+	@bin/lesson_check.py -s . -p ${PARSER} -r _includes/links.md
+
+## lesson-check-all : validate lesson Markdown, checking line lengths and trailing whitespace.
+lesson-check-all :
+	@bin/lesson_check.py -s . -p ${PARSER} -l -w
+
+## lesson-figures   : re-generate inclusion displaying all figures.
+lesson-figures :
+	@bin/extract_figures.py -p ${PARSER} ${MARKDOWN_SRC} > _includes/all_figures.html
+
+## unittest         : run unit tests on checking tools.
+unittest :
+	python bin/test_lesson_check.py
+
+## lesson-files     : show expected names of generated files for debugging.
+lesson-files :
+	@echo 'RMD_SRC:' ${RMD_SRC}
+	@echo 'RMD_DST:' ${RMD_DST}
+	@echo 'MARKDOWN_SRC:' ${MARKDOWN_SRC}
+	@echo 'HTML_DST:' ${HTML_DST}
+
+## lesson-fixme     : show FIXME markers embedded in source files.
+lesson-fixme :
+	@fgrep -i -n FIXME ${MARKDOWN_SRC} || true
+
+#-------------------------------------------------------------------------------
+# Include extra commands if available.
+#-------------------------------------------------------------------------------
+
+-include commands.mk

README.md

+git-novice
+==========
+
+An introduction to version control for novices using Git.
+Please see <https://swcarpentry.github.io/git-novice/> for a rendered version of this material,
+[the lesson template documentation][lesson-example]
+for instructions on formatting, building, and submitting material,
+or run `make` in this directory for a list of helpful commands.
+
+Maintainers:
+
+* [Ivan Gonzalez][gonzalez_ivan]
+* [Daisie Huang][huang_daisie]
+
+[gonzalez_ivan]: http://software-carpentry.org/team/#gonzalez_ivan
+[huang_daisie]: http://software-carpentry.org/team/#huang_daisie
+[lesson-example]: https://swcarpentry.github.io/lesson-example

_config.yml

+#------------------------------------------------------------
+# Values for this lesson.
+#------------------------------------------------------------
+
+# Which carpentry is this ("swc" or "dc")?
+carpentry: "swc"
+
+# Overall title for pages.
+title: "Version Control with Git"
+
+# Contact email address.
+email: lessons@software-carpentry.org
+
+#------------------------------------------------------------
+# Generic settings (should not need to change).
+#------------------------------------------------------------
+
+# What kind of thing is this ("workshop" or "lesson")?
+kind: "lesson"
+
+# Magic to make URLs resolve both locally and on GitHub.
+# See https://help.github.com/articles/repository-metadata-on-github-pages/.
+repository: <USERNAME>/<PROJECT>
+
+# Sites.
+amy_site: "https://amy.software-carpentry.org/workshops"
+dc_site: "http://datacarpentry.org"
+swc_github: "https://github.com/swcarpentry"
+swc_site: "https://software-carpentry.org"
+swc_pages: "https://swcarpentry.github.io"
+template_repo: "https://github.com/swcarpentry/styles"
+example_repo: "https://github.com/swcarpentry/lesson-example"
+example_site: "https://swcarpentry.github.com/lesson-example"
+workshop_repo: "https://github.com/swcarpentry/workshop-template"
+workshop_site: "https://swcarpentry.github.io/workshop-template"
+training_site: "https://swcarpentry.github.io/instructor-training"
+
+# Surveys.
+pre_survey: "https://www.surveymonkey.com/r/swc_pre_workshop_v1?workshop_id="
+post_survey: "https://www.surveymonkey.com/r/swc_post_workshop_v1?workshop_id="
+
+# Start time in minutes (0 to be clock-independent, 540 to show a start at 09:00 am)
+start_time: 0
+
+# Specify that things in the episodes collection should be output.
+collections:
+  episodes:
+    output: true
+    permalink: /:path/
+  extras:
+    output: true
+
+# Set the default layout for things in the episodes collection.
+defaults:
+  - values:
+      root: ..
+  - scope:
+      path: ""
+      type: episodes
+    values:
+      layout: episode
+
+# Files and directories that are not to be copied.
+exclude:
+  - Makefile
+  - bin
+
+# Turn off built-in syntax highlighting.
+highlighter: false