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Commit 08e2b69f authored by Javier's avatar Javier
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docs/build/assets/documenter.js
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...@@ -208,6 +208,10 @@ $(document).ready(function() { ...@@ -208,6 +208,10 @@ $(document).ready(function() {
$('#documenter-themepicker option').each(function(i,e) { $('#documenter-themepicker option').each(function(i,e) {
e.selected = (e.value === theme); e.selected = (e.value === theme);
}) })
} else {
$('#documenter-themepicker option').each(function(i,e) {
e.selected = $("html").hasClass(`theme--${e.value}`);
})
} }
} }
}) })
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docs/build/assets/search.js
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...@@ -181,7 +181,7 @@ $(document).ready(function() { ...@@ -181,7 +181,7 @@ $(document).ready(function() {
var store = {} var store = {}
documenterSearchIndex['docs'].forEach(function(e) { documenterSearchIndex['docs'].forEach(function(e) {
store[e.location] = {title: e.title, category: e.category} store[e.location] = {title: e.title, category: e.category, page: e.page}
}) })
$(function(){ $(function(){
...@@ -221,7 +221,11 @@ $(document).ready(function() { ...@@ -221,7 +221,11 @@ $(document).ready(function() {
data = store[result.ref] data = store[result.ref]
link = $('<a class="docs-label">'+data.title+'</a>') link = $('<a class="docs-label">'+data.title+'</a>')
link.attr('href', documenterBaseURL+'/'+result.ref) link.attr('href', documenterBaseURL+'/'+result.ref)
cat = $('<span class="docs-category">('+data.category+')</span>') if (data.category != "page"){
cat = $('<span class="docs-category">('+data.category+', '+data.page+')</span>')
} else {
cat = $('<span class="docs-category">('+data.category+')</span>')
}
li = $('<li>').append(link).append(" ").append(cat) li = $('<li>').append(link).append(" ").append(cat)
searchresults.append(li) searchresults.append(li)
}) })
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docs/build/assets/themeswap.js
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// Small function to quickly swap out themes. Gets put into the <head> tag.. // Small function to quickly swap out themes. Gets put into the <head> tag..
function set_theme_from_local_storage() { function set_theme_from_local_storage() {
// Browser does not support Web Storage, bail early. // Intialize the theme to null, which means default
if(typeof(window.localStorage) === "undefined") return; var theme = null;
// Get the user-picked theme from localStorage. May be `null`, which means the default // If the browser supports the localstorage and is not disabled then try to get the
// theme. // documenter theme
var theme = window.localStorage.getItem("documenter-theme"); if(window.localStorage != null) {
// Get the user-picked theme from localStorage. May be `null`, which means the default
// theme.
theme = window.localStorage.getItem("documenter-theme");
}
// Check if the browser supports user color preference
var darkPreference = false;
// Check if the users preference is for dark color scheme
if(window.matchMedia('(prefers-color-scheme: dark)').matches === true) {
darkPreference = true;
}
// Initialize a few variables for the loop: // Initialize a few variables for the loop:
// //
// - active: will contain the index of the theme that should be active. Note that there // - active: will contain the index of the theme that should be active. Note that there
...@@ -14,7 +24,7 @@ function set_theme_from_local_storage() { ...@@ -14,7 +24,7 @@ function set_theme_from_local_storage() {
// //
// - disabled: style sheets that should be disabled (i.e. all the theme style sheets // - disabled: style sheets that should be disabled (i.e. all the theme style sheets
// that are not the currently active theme) // that are not the currently active theme)
var active = null; var disabled = []; var active = null; var disabled = []; var darkTheme = null;
for (var i = 0; i < document.styleSheets.length; i++) { for (var i = 0; i < document.styleSheets.length; i++) {
var ss = document.styleSheets[i]; var ss = document.styleSheets[i];
// The <link> tag of each style sheet is expected to have a data-theme-name attribute // The <link> tag of each style sheet is expected to have a data-theme-name attribute
...@@ -25,8 +35,12 @@ function set_theme_from_local_storage() { ...@@ -25,8 +35,12 @@ function set_theme_from_local_storage() {
// To distinguish the default (primary) theme, it needs to have the data-theme-primary // To distinguish the default (primary) theme, it needs to have the data-theme-primary
// attribute set. // attribute set.
var isprimary = (ss.ownerNode.getAttribute("data-theme-primary") !== null); var isprimary = (ss.ownerNode.getAttribute("data-theme-primary") !== null);
// Check if the theme is primary dark theme
var isDarkTheme = (ss.ownerNode.getAttribute("data-theme-primary-dark") !== null);
// If ss is for dark theme then set the value of darkTheme to the name of the theme
if(isDarkTheme) darkTheme = themename;
// If we find a matching theme (and it's not the default), we'll set active to non-null // If we find a matching theme (and it's not the default), we'll set active to non-null
if(!isprimary && themename === theme) active = i; if(themename === theme) active = i;
// Store the style sheets of inactive themes so that we could disable them // Store the style sheets of inactive themes so that we could disable them
if(themename !== theme) disabled.push(ss); if(themename !== theme) disabled.push(ss);
} }
...@@ -38,5 +52,15 @@ function set_theme_from_local_storage() { ...@@ -38,5 +52,15 @@ function set_theme_from_local_storage() {
ss.disabled = true; ss.disabled = true;
}); });
} }
else if(darkTheme !== null && darkPreference === true) {
// If we did find an active theme, we'll (1) add the theme--$(theme) class to <html>
document.getElementsByTagName('html')[0].className = "theme--" + darkTheme;
// and (2) disable all the other theme stylesheets
disabled.forEach(function(ss){
if (ss.ownerNode.getAttribute("data-theme-name") !== darkTheme) {
ss.disabled = true;
}
});
}
} }
set_theme_from_local_storage(); set_theme_from_local_storage();
docs/build/index.html
View file @ 08e2b69f
<!DOCTYPE html> <!DOCTYPE html>
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docs/build/linalg.html
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docs/build/obs.html
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docs/build/reader.html
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docs/build/search.html
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<!DOCTYPE html> <!DOCTYPE html>
<html lang="en"><head><meta charset="UTF-8"/><meta name="viewport" content="width=device-width, initial-scale=1.0"/><title>Search · juobs Documentation</title><link href="https://fonts.googleapis.com/css?family=Lato|Roboto+Mono" rel="stylesheet" type="text/css"/><link href="https://cdnjs.cloudflare.com/ajax/libs/font-awesome/5.15.0/css/fontawesome.min.css" rel="stylesheet" type="text/css"/><link href="https://cdnjs.cloudflare.com/ajax/libs/font-awesome/5.15.0/css/solid.min.css" rel="stylesheet" type="text/css"/><link href="https://cdnjs.cloudflare.com/ajax/libs/font-awesome/5.15.0/css/brands.min.css" rel="stylesheet" type="text/css"/><link href="https://cdnjs.cloudflare.com/ajax/libs/KaTeX/0.11.1/katex.min.css" rel="stylesheet" type="text/css"/><script>documenterBaseURL="."</script><script src="https://cdnjs.cloudflare.com/ajax/libs/require.js/2.3.6/require.min.js" data-main="assets/documenter.js"></script><script src="siteinfo.js"></script><script src="../versions.js"></script><link class="docs-theme-link" rel="stylesheet" type="text/css" href="assets/themes/documenter-dark.css" data-theme-name="documenter-dark"/><link class="docs-theme-link" rel="stylesheet" type="text/css" href="assets/themes/documenter-light.css" data-theme-name="documenter-light" data-theme-primary/><script src="assets/themeswap.js"></script></head><body><div id="documenter"><nav class="docs-sidebar"><div class="docs-package-name"><span class="docs-autofit">juobs Documentation</span></div><form class="docs-search" action="search.html"><input class="docs-search-query" id="documenter-search-query" name="q" type="text" placeholder="Search docs"/></form><ul class="docs-menu"><li><a class="tocitem" href="index.html">Home</a></li><li><a class="tocitem" href="reader.html">Reader</a></li><li><a class="tocitem" href="tools.html">Tools</a></li><li><a class="tocitem" href="obs.html">Observables</a></li><li><a class="tocitem" href="linalg.html">Linear Algebra</a></li></ul><div class="docs-version-selector field has-addons"><div class="control"><span class="docs-label button is-static is-size-7">Version</span></div><div class="docs-selector control is-expanded"><div class="select is-fullwidth is-size-7"><select id="documenter-version-selector"></select></div></div></div></nav><div class="docs-main"><header class="docs-navbar"><nav class="breadcrumb"><ul class="is-hidden-mobile"><li class="is-active"><a href="search.html">Search</a></li></ul><ul class="is-hidden-tablet"><li class="is-active"><a href="search.html">Search</a></li></ul></nav><div class="docs-right"><a class="docs-settings-button fas fa-cog" id="documenter-settings-button" href="#" title="Settings"></a><a class="docs-sidebar-button fa fa-bars is-hidden-desktop" id="documenter-sidebar-button" href="#"></a></div></header><article><p id="documenter-search-info">Loading search...</p><ul id="documenter-search-results"></ul></article><nav class="docs-footer"><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> on <span class="colophon-date" title="Friday 26 February 2021 09:53">Friday 26 February 2021</span>. 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docs/src/tools.md
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...@@ -2,6 +2,7 @@ ...@@ -2,6 +2,7 @@
```@docs ```@docs
corr_obs corr_obs
md_sea md_sea
md_val
lin_fit lin_fit
fit_routine fit_routine
``` ```
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src/juobs_reader.jl
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...@@ -89,7 +89,8 @@ This function read a mesons dat file at a given path and returns a vector of `CD ...@@ -89,7 +89,8 @@ This function read a mesons dat file at a given path and returns a vector of `CD
Dirac structures `g1` and/or `g2` can be passed as string arguments in order to filter correaltors. Dirac structures `g1` and/or `g2` can be passed as string arguments in order to filter correaltors.
ADerrors id can be specified as argument. If is not specified, the `id` is fixed according to the ensemble name (example: "H400"-> id = 400) ADerrors id can be specified as argument. If is not specified, the `id` is fixed according to the ensemble name (example: "H400"-> id = 400)
*For the old version (without smearing, distance preconditioning and theta) set legacy=true *For the old version (without smearing, distance preconditioning and theta) set legacy=true.
Examples: Examples:
```@example ```@example
read_mesons(path) read_mesons(path)
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src/juobs_tools.jl
View file @ 08e2b69f
...@@ -158,7 +158,7 @@ where ``O_i`` are primary observables ...@@ -158,7 +158,7 @@ where ``O_i`` are primary observables
`md` is a vector that contains the derivative of the action ``S`` with respect `md` is a vector that contains the derivative of the action ``S`` with respect
to the sea quark masses for each replica. `md[irep][irw, icfg]` to the sea quark masses for each replica. `md[irep][irw, icfg]`
`md_sea` returns a tuple of uwreal observables ``(dA/dm_l, dA/dm_s)|_sea``, `md_sea` returns a tuple of uwreal observables ``(dA/dm_l, dA/dm_s)|_{sea}``,
where ``m_l`` and ``m_s`` are the light and strange quark masses. where ``m_l`` and ``m_s`` are the light and strange quark masses.
```@example ```@example
...@@ -252,7 +252,7 @@ where ``O_i`` are primary observables ...@@ -252,7 +252,7 @@ where ``O_i`` are primary observables
`md` is a vector that contains the derivative of the action ``S`` with respect `md` is a vector that contains the derivative of the action ``S`` with respect
to the sea quark masses for each replica. `md[irep][irw, icfg]` to the sea quark masses for each replica. `md[irep][irw, icfg]`
`md_val` returns a tuple of `uwreal` observables ``(dA/dm_1, dA/dm_2)|_val``, `md_val` returns a tuple of `uwreal` observables ``(dA/dm_1, dA/dm_2)|_{val}``,
where ``m_1`` and ``m_2`` are the correlator masses. where ``m_1`` and ``m_2`` are the correlator masses.
```@example ```@example
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