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Javier Ugarrio
juobs
Commits
6e94e6a0
Commit
6e94e6a0
authored
Jan 20, 2021
by
Javier
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read_ms includes dtr != 1
parent
efdaa98b
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+31
-20
src/juobs_reader.jl
src/juobs_reader.jl
+31
-20
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src/juobs_reader.jl
View file @
6e94e6a0
...
...
@@ -259,20 +259,20 @@ function read_md(path::String)
end
@doc
raw
"""
read_ms(path::String
)
read_ms(path::String
; id::Union{Int64, Nothing}=nothing, dtr::Int64=1)
Reads openQCD ms dat files at a given path. This method return:
Reads openQCD ms dat files at a given path. This method return
YData
:
t(t): flow time values
Wsl(icfg, x0, t): the time-slice sums of the densities of the Wilson plaquette action
Ysl(icfg, x0, t): the time-slice sums of the densities of the Yang-Mills action
Qsl(icfg, x0, t): the time-slice sums of the densities of the topological charge
vtr: vector that contains trajectory number
id: ensmble id
Examples:
```@example
t, W, Y, Q
= read_ms(path)
Y
= read_ms(path)
```
"""
function
read_ms
(
path
::
String
;
id
::
Union
{
Int64
,
Nothing
}
=
nothing
)
function
read_ms
(
path
::
String
;
id
::
Union
{
Int64
,
Nothing
}
=
nothing
,
dtr
::
Int64
=
1
)
if
isnothing
(
id
)
bname
=
basename
(
path
)
m
=
findfirst
(
r
"[A-Z][0-9]{3}r[0-9]{3}"
,
bname
)
...
...
@@ -290,27 +290,38 @@ function read_ms(path::String; id::Union{Int64, Nothing}=nothing)
ntr
=
Int32
((
fsize
-
3
*
4
-
8
)
/
datsize
)
vntr
=
Vector
{
Int32
}(
undef
,
ntr
)
if
mod
(
ntr
,
dtr
)
!=
0
error
(
"ntr / dtr must be exact"
)
end
vntr
=
Vector
{
Int32
}(
undef
,
div
(
ntr
,
dtr
))
# x0, t, cfg
Wsl
=
Array
{
Float64
}(
undef
,
ntr
,
tvals
,
nn
+
1
)
Ysl
=
Array
{
Float64
}(
undef
,
ntr
,
tvals
,
nn
+
1
)
Qsl
=
Array
{
Float64
}(
undef
,
ntr
,
tvals
,
nn
+
1
)
Wsl
=
Array
{
Float64
}(
undef
,
div
(
ntr
,
dtr
)
,
tvals
,
nn
+
1
)
Ysl
=
Array
{
Float64
}(
undef
,
div
(
ntr
,
dtr
)
,
tvals
,
nn
+
1
)
Qsl
=
Array
{
Float64
}(
undef
,
div
(
ntr
,
dtr
)
,
tvals
,
nn
+
1
)
k
=
0
for
itr
=
1
:
ntr
vntr
[
itr
]
=
read
(
data
,
Int32
)
tmp
=
read
(
data
,
Int32
)
if
mod
(
itr
,
dtr
)
==
0
k
+=
1
vntr
[
k
]
=
tmp
end
for
iobs
=
1
:
3
for
inn
=
0
:
nn
tmp
=
Vector
{
Float64
}(
undef
,
tvals
)
read!
(
data
,
tmp
)
if
iobs
==
1
Wsl
[
itr
,
:
,
inn
+
1
]
=
tmp
elseif
iobs
==
2
Ysl
[
itr
,
:
,
inn
+
1
]
=
tmp
elseif
iobs
==
3
Qsl
[
itr
,
:
,
inn
+
1
]
=
tmp
tmp2
=
Vector
{
Float64
}(
undef
,
tvals
)
read!
(
data
,
tmp2
)
if
mod
(
itr
,
dtr
)
==
0
if
iobs
==
1
Wsl
[
k
,
:
,
inn
+
1
]
=
tmp2
elseif
iobs
==
2
Ysl
[
k
,
:
,
inn
+
1
]
=
tmp2
elseif
iobs
==
3
Qsl
[
k
,
:
,
inn
+
1
]
=
tmp2
end
end
end
end
end
...
...
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