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<htmllang="en"><head><metacharset="UTF-8"/><metaname="viewport"content="width=device-width, initial-scale=1.0"/><title>Home · juobs Documentation</title><linkhref="https://fonts.googleapis.com/css?family=Lato|Roboto+Mono"rel="stylesheet"type="text/css"/><linkhref="https://cdnjs.cloudflare.com/ajax/libs/font-awesome/5.15.0/css/fontawesome.min.css"rel="stylesheet"type="text/css"/><linkhref="https://cdnjs.cloudflare.com/ajax/libs/font-awesome/5.15.0/css/solid.min.css"rel="stylesheet"type="text/css"/><linkhref="https://cdnjs.cloudflare.com/ajax/libs/font-awesome/5.15.0/css/brands.min.css"rel="stylesheet"type="text/css"/><linkhref="https://cdnjs.cloudflare.com/ajax/libs/KaTeX/0.11.1/katex.min.css"rel="stylesheet"type="text/css"/><script>documenterBaseURL="."</script><script src="https://cdnjs.cloudflare.com/ajax/libs/require.js/2.3.6/require.min.js"data-main="assets/documenter.js"></script><script src="siteinfo.js"></script><script src="../versions.js"></script><linkclass="docs-theme-link"rel="stylesheet"type="text/css"href="assets/themes/documenter-dark.css"data-theme-name="documenter-dark"data-theme-primary-dark/><linkclass="docs-theme-link"rel="stylesheet"type="text/css"href="assets/themes/documenter-light.css"data-theme-name="documenter-light"data-theme-primary/><script src="assets/themeswap.js"></script></head><body><divid="documenter"><navclass="docs-sidebar"><divclass="docs-package-name"><spanclass="docs-autofit">juobs Documentation</span></div><formclass="docs-search"action="search.html"><inputclass="docs-search-query"id="documenter-search-query"name="q"type="text"placeholder="Search docs"/></form><ulclass="docs-menu"><liclass="is-active"><aclass="tocitem"href="index.html">Home</a><ulclass="internal"><li><aclass="tocitem"href="#Contents"><span>Contents</span></a></li></ul></li><li><aclass="tocitem"href="reader.html">Reader</a></li><li><aclass="tocitem"href="tools.html">Tools</a></li><li><aclass="tocitem"href="obs.html">Observables</a></li><li><aclass="tocitem"href="linalg.html">Linear Algebra</a></li></ul><divclass="docs-version-selector field has-addons"><divclass="control"><spanclass="docs-label button is-static is-size-7">Version</span></div><divclass="docs-selector control is-expanded"><divclass="select is-fullwidth is-size-7"><selectid="documenter-version-selector"></select></div></div></div></nav><divclass="docs-main"><headerclass="docs-navbar"><navclass="breadcrumb"><ulclass="is-hidden-mobile"><liclass="is-active"><ahref="index.html">Home</a></li></ul><ulclass="is-hidden-tablet"><liclass="is-active"><ahref="index.html">Home</a></li></ul></nav><divclass="docs-right"><aclass="docs-edit-link"href="https://gitlab.ift.uam-csic.es/jugarrio/juobs"title="Edit on GitLab"><spanclass="docs-icon fab"></span><spanclass="docs-label is-hidden-touch">Edit on GitLab</span></a><aclass="docs-settings-button fas fa-cog"id="documenter-settings-button"href="#"title="Settings"></a><aclass="docs-sidebar-button fa fa-bars is-hidden-desktop"id="documenter-sidebar-button"href="#"></a></div></header><articleclass="content"id="documenter-page"><h1id="DOCUMENTATION"><aclass="docs-heading-anchor"href="#DOCUMENTATION">DOCUMENTATION</a><aid="DOCUMENTATION-1"></a><aclass="docs-heading-anchor-permalink"href="#DOCUMENTATION"title="Permalink"></a></h1><h2id="Contents"><aclass="docs-heading-anchor"href="#Contents">Contents</a><aid="Contents-1"></a><aclass="docs-heading-anchor-permalink"href="#Contents"title="Permalink"></a></h2><ul><li><ahref="reader.html#Reader">Reader</a></li><li><ahref="tools.html#Tools">Tools</a></li><li><ahref="obs.html#Observables">Observables</a></li><li><ahref="linalg.html#Linear-Algebra">Linear Algebra</a></li></ul></article><navclass="docs-footer"><aclass="docs-footer-nextpage"href="reader.html">Reader »</a><divclass="flexbox-break"></div><pclass="footer-message">Powered by <ahref="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <ahref="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><divclass="modal"id="documenter-settings"><divclass="modal-background"></div><divclass="modal-card"><headerclass="modal-card-head"><pclass="modal-card-title">Settings</p><buttonclass="delete"></button></header><sectionclass="modal-card-body"><p><labelclass="label">Theme</label><divclass="select"><selectid="documenter-themepicker"><optionvalue="documenter-light">documenter-light</option><optionvalue="documenter-dark">documenter-dark</option></select></div></p><hr/><p>This document was generated with <ahref="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> on <spanclass="colophon-date"title="Friday 17 September 2021 08:40">Friday 17 September 2021</span>. Using Julia version 1.5.0.</p></section><footerclass="modal-card-foot"></footer></div></div></div></body></html>
Julia></code></pre></div><aclass="docs-sourcelink"target="_blank"href="https://gitlab.ift.uam-csic.es/jugarrio/juobs">source</a></section></article><articleclass="docstring"><header><aclass="docstring-binding"id="juobs.getall_eigvecs"href="#juobs.getall_eigvecs"><code>juobs.getall_eigvecs</code></a> — <spanclass="docstring-category">Function</span></header><section><div><pre><codeclass="language-julia">getall_eigvecs(a::Vector{Matrix}, delta_t; iter=30 )</code></pre><p>This function solves a GEVP problem, returning the eigenvectors, for a list of matrices.</p><p><span>$C(t_i)v_i = λ_i C(t_i-\delta_t) v_i$</span>, with i=1:lenght(a)</p><p>Here <code>delta_t</code> is the time shift within the two matrices of the problem, and is kept fixed. It takes as input:</p><ul><li><p><code>a::Vector{Matrix}</code> : a vector of matrices</p></li><li><p><code>delta_t::Int64</code> : the fixed time shift t-t_0</p></li><li><p><code>iter=30</code> : the number of iterations of the qr algorithm used to extract the eigenvalues </p></li></ul><p>It returns:</p><ul><li><code>res = Vector{Matrix{uwreal}}</code></li></ul><p>where each <code>res[i]</code> is a matrix with the eigenvectors as columns Examples:</p><pre><codeclass="language-">mat_array = get_matrix(diag, upper_diag)
evecs = getall_eigvecs(mat_array, 5)</code></pre></div><aclass="docs-sourcelink"target="_blank"href="https://gitlab.ift.uam-csic.es/jugarrio/juobs">source</a></section></article></article><navclass="docs-footer"><aclass="docs-footer-prevpage"href="obs.html">« Observables</a><divclass="flexbox-break"></div><pclass="footer-message">Powered by <ahref="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <ahref="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><divclass="modal"id="documenter-settings"><divclass="modal-background"></div><divclass="modal-card"><headerclass="modal-card-head"><pclass="modal-card-title">Settings</p><buttonclass="delete"></button></header><sectionclass="modal-card-body"><p><labelclass="label">Theme</label><divclass="select"><selectid="documenter-themepicker"><optionvalue="documenter-light">documenter-light</option><optionvalue="documenter-dark">documenter-dark</option></select></div></p><hr/><p>This document was generated with <ahref="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> on <spanclass="colophon-date"title="Tuesday 23 March 2021 11:06">Tuesday 23 March 2021</span>. Using Julia version 1.5.0.</p></section><footerclass="modal-card-foot"></footer></div></div></div></body></html>
evecs = getall_eigvecs(mat_array, 5)</code></pre></div><aclass="docs-sourcelink"target="_blank"href="https://gitlab.ift.uam-csic.es/jugarrio/juobs">source</a></section></article></article><navclass="docs-footer"><aclass="docs-footer-prevpage"href="obs.html">« Observables</a><divclass="flexbox-break"></div><pclass="footer-message">Powered by <ahref="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <ahref="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><divclass="modal"id="documenter-settings"><divclass="modal-background"></div><divclass="modal-card"><headerclass="modal-card-head"><pclass="modal-card-title">Settings</p><buttonclass="delete"></button></header><sectionclass="modal-card-body"><p><labelclass="label">Theme</label><divclass="select"><selectid="documenter-themepicker"><optionvalue="documenter-light">documenter-light</option><optionvalue="documenter-dark">documenter-dark</option></select></div></p><hr/><p>This document was generated with <ahref="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> on <spanclass="colophon-date"title="Friday 17 September 2021 08:40">Friday 17 September 2021</span>. Using Julia version 1.5.0.</p></section><footerclass="modal-card-foot"></footer></div></div></div></body></html>
dat = read_mesons([path1, path2], "G5", "G5")
Y = read_ms.([path1_ms, path2_ms])
truncate_data!(dat, [nc1, nc2])
truncate_data!(Y, [nc1, nc2])</code></pre></div><aclass="docs-sourcelink"target="_blank"href="https://gitlab.ift.uam-csic.es/jugarrio/juobs">source</a></section></article></article><navclass="docs-footer"><aclass="docs-footer-prevpage"href="index.html">« Home</a><aclass="docs-footer-nextpage"href="tools.html">Tools »</a><divclass="flexbox-break"></div><pclass="footer-message">Powered by <ahref="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <ahref="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><divclass="modal"id="documenter-settings"><divclass="modal-background"></div><divclass="modal-card"><headerclass="modal-card-head"><pclass="modal-card-title">Settings</p><buttonclass="delete"></button></header><sectionclass="modal-card-body"><p><labelclass="label">Theme</label><divclass="select"><selectid="documenter-themepicker"><optionvalue="documenter-light">documenter-light</option><optionvalue="documenter-dark">documenter-dark</option></select></div></p><hr/><p>This document was generated with <ahref="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> on <spanclass="colophon-date"title="Tuesday 23 March 2021 11:06">Tuesday 23 March 2021</span>. Using Julia version 1.5.0.</p></section><footerclass="modal-card-foot"></footer></div></div></div></body></html>
truncate_data!(Y, [nc1, nc2])</code></pre></div><aclass="docs-sourcelink"target="_blank"href="https://gitlab.ift.uam-csic.es/jugarrio/juobs">source</a></section></article></article><navclass="docs-footer"><aclass="docs-footer-prevpage"href="index.html">« Home</a><aclass="docs-footer-nextpage"href="tools.html">Tools »</a><divclass="flexbox-break"></div><pclass="footer-message">Powered by <ahref="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <ahref="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><divclass="modal"id="documenter-settings"><divclass="modal-background"></div><divclass="modal-card"><headerclass="modal-card-head"><pclass="modal-card-title">Settings</p><buttonclass="delete"></button></header><sectionclass="modal-card-body"><p><labelclass="label">Theme</label><divclass="select"><selectid="documenter-themepicker"><optionvalue="documenter-light">documenter-light</option><optionvalue="documenter-dark">documenter-dark</option></select></div></p><hr/><p>This document was generated with <ahref="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> on <spanclass="colophon-date"title="Friday 17 September 2021 08:40">Friday 17 September 2021</span>. Using Julia version 1.5.0.</p></section><footerclass="modal-card-foot"></footer></div></div></div></body></html>
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<htmllang="en"><head><metacharset="UTF-8"/><metaname="viewport"content="width=device-width, initial-scale=1.0"/><title>Search · juobs Documentation</title><linkhref="https://fonts.googleapis.com/css?family=Lato|Roboto+Mono"rel="stylesheet"type="text/css"/><linkhref="https://cdnjs.cloudflare.com/ajax/libs/font-awesome/5.15.0/css/fontawesome.min.css"rel="stylesheet"type="text/css"/><linkhref="https://cdnjs.cloudflare.com/ajax/libs/font-awesome/5.15.0/css/solid.min.css"rel="stylesheet"type="text/css"/><linkhref="https://cdnjs.cloudflare.com/ajax/libs/font-awesome/5.15.0/css/brands.min.css"rel="stylesheet"type="text/css"/><linkhref="https://cdnjs.cloudflare.com/ajax/libs/KaTeX/0.11.1/katex.min.css"rel="stylesheet"type="text/css"/><script>documenterBaseURL="."</script><script src="https://cdnjs.cloudflare.com/ajax/libs/require.js/2.3.6/require.min.js"data-main="assets/documenter.js"></script><script src="siteinfo.js"></script><script src="../versions.js"></script><linkclass="docs-theme-link"rel="stylesheet"type="text/css"href="assets/themes/documenter-dark.css"data-theme-name="documenter-dark"data-theme-primary-dark/><linkclass="docs-theme-link"rel="stylesheet"type="text/css"href="assets/themes/documenter-light.css"data-theme-name="documenter-light"data-theme-primary/><script src="assets/themeswap.js"></script></head><body><divid="documenter"><navclass="docs-sidebar"><divclass="docs-package-name"><spanclass="docs-autofit">juobs Documentation</span></div><formclass="docs-search"action="search.html"><inputclass="docs-search-query"id="documenter-search-query"name="q"type="text"placeholder="Search docs"/></form><ulclass="docs-menu"><li><aclass="tocitem"href="index.html">Home</a></li><li><aclass="tocitem"href="reader.html">Reader</a></li><li><aclass="tocitem"href="tools.html">Tools</a></li><li><aclass="tocitem"href="obs.html">Observables</a></li><li><aclass="tocitem"href="linalg.html">Linear Algebra</a></li></ul><divclass="docs-version-selector field has-addons"><divclass="control"><spanclass="docs-label button is-static is-size-7">Version</span></div><divclass="docs-selector control is-expanded"><divclass="select is-fullwidth is-size-7"><selectid="documenter-version-selector"></select></div></div></div></nav><divclass="docs-main"><headerclass="docs-navbar"><navclass="breadcrumb"><ulclass="is-hidden-mobile"><liclass="is-active"><ahref="search.html">Search</a></li></ul><ulclass="is-hidden-tablet"><liclass="is-active"><ahref="search.html">Search</a></li></ul></nav><divclass="docs-right"><aclass="docs-settings-button fas fa-cog"id="documenter-settings-button"href="#"title="Settings"></a><aclass="docs-sidebar-button fa fa-bars is-hidden-desktop"id="documenter-sidebar-button"href="#"></a></div></header><article><pid="documenter-search-info">Loading search...</p><ulid="documenter-search-results"></ul></article><navclass="docs-footer"><pclass="footer-message">Powered by <ahref="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <ahref="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><divclass="modal"id="documenter-settings"><divclass="modal-background"></div><divclass="modal-card"><headerclass="modal-card-head"><pclass="modal-card-title">Settings</p><buttonclass="delete"></button></header><sectionclass="modal-card-body"><p><labelclass="label">Theme</label><divclass="select"><selectid="documenter-themepicker"><optionvalue="documenter-light">documenter-light</option><optionvalue="documenter-dark">documenter-dark</option></select></div></p><hr/><p>This document was generated with <ahref="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> on <spanclass="colophon-date"title="Friday 17 September 2021 08:40">Friday 17 September 2021</span>. Using Julia version 1.5.0.</p></section><footerclass="modal-card-foot"></footer></div></div></div></body><script src="search_index.js"></script><script src="assets/search.js"></script></html>
fit_routine(model::Function, xdata::Array{uwreal}, ydata::Array{uwreal}, param::Int64=3; wpm::Union{Dict{Int64,Vector{Float64}},Dict{String,Vector{Float64}}, Nothing}=nothing, covar::Bool=false)</code></pre><p>Given a model function with a number param of parameters and an array of <code>uwreal</code>, this function fit ydata with the given <code>model</code> and print fit information The method return an array <code>upar</code> with the best fit parameters with their errors. The flag <code>wpm</code> is an optional array of Float64 of lenght 4. The first three paramenters specify the criteria to determine the summation windows:</p><ul><li><p><code>vp[1]</code>: The autocorrelation function is summed up to <span>$t = round(vp[1])$</span>.</p></li><li><p><code>vp[2]</code>: The sumation window is determined using U. Wolff poposal with <span>$S_\tau = wpm[2]$</span></p></li><li><p><code>vp[3]</code>: The autocorrelation function <span>$\Gamma(t)$</span> is summed up a point where its error <span>$\delta\Gamma(t)$</span> is a factor <code>vp[3]</code> times larger than the signal.</p></li></ul><p>An additional fourth parameter <code>vp[4]</code>, tells ADerrors to add a tail to the error with <span>$\tau_{exp} = wpm[4]$</span>. Negative values of <code>wpm[1:4]</code> are ignored and only one component of <code>wpm[1:3]</code> needs to be positive. If the flag <code>covar</code>is set to true, <code>fit_routine</code> takes into account covariances between x and y for each data point.</p><pre><codeclass="language-">@. model(x,p) = p[1] + p[2] * exp(-(p[3]-p[1])*x)
fit_routine(model, xdata, ydata, param=3, covar=true)</code></pre></div><aclass="docs-sourcelink"target="_blank"href="https://gitlab.ift.uam-csic.es/jugarrio/juobs">source</a></section></article></article><navclass="docs-footer"><aclass="docs-footer-prevpage"href="reader.html">« Reader</a><aclass="docs-footer-nextpage"href="obs.html">Observables »</a><divclass="flexbox-break"></div><pclass="footer-message">Powered by <ahref="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <ahref="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><divclass="modal"id="documenter-settings"><divclass="modal-background"></div><divclass="modal-card"><headerclass="modal-card-head"><pclass="modal-card-title">Settings</p><buttonclass="delete"></button></header><sectionclass="modal-card-body"><p><labelclass="label">Theme</label><divclass="select"><selectid="documenter-themepicker"><optionvalue="documenter-light">documenter-light</option><optionvalue="documenter-dark">documenter-dark</option></select></div></p><hr/><p>This document was generated with <ahref="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> on <spanclass="colophon-date"title="Tuesday 23 March 2021 11:06">Tuesday 23 March 2021</span>. Using Julia version 1.5.0.</p></section><footerclass="modal-card-foot"></footer></div></div></div></body></html>
fit_routine(model, xdata, ydata, param=3, covar=true)</code></pre></div><aclass="docs-sourcelink"target="_blank"href="https://gitlab.ift.uam-csic.es/jugarrio/juobs">source</a></section></article></article><navclass="docs-footer"><aclass="docs-footer-prevpage"href="reader.html">« Reader</a><aclass="docs-footer-nextpage"href="obs.html">Observables »</a><divclass="flexbox-break"></div><pclass="footer-message">Powered by <ahref="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <ahref="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><divclass="modal"id="documenter-settings"><divclass="modal-background"></div><divclass="modal-card"><headerclass="modal-card-head"><pclass="modal-card-title">Settings</p><buttonclass="delete"></button></header><sectionclass="modal-card-body"><p><labelclass="label">Theme</label><divclass="select"><selectid="documenter-themepicker"><optionvalue="documenter-light">documenter-light</option><optionvalue="documenter-dark">documenter-dark</option></select></div></p><hr/><p>This document was generated with <ahref="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> on <spanclass="colophon-date"title="Friday 17 September 2021 08:40">Friday 17 September 2021</span>. Using Julia version 1.5.0.</p></section><footerclass="modal-card-foot"></footer></div></div></div></body></html>
function fit_routine(model::Function,xdata::Array{<:Real},ydata::Array{uwreal},param::Int64=3;wpm::Union{Dict{Int64,Vector{Float64}},Dict{String,Vector{Float64}},Nothing}=nothing)
